[AMBER] AMBER 9 install gfortran, not need AmberTool

From: gromacs <ptf1242.163.com>
Date: Tue, 15 Feb 2011 08:20:24 +0800 (CST)

The version i install is AMBER 9, not AMBER 10 or AMBER 11. It seems AMBER 9 not need AmberTool, Do i need to still instll AmberTool?
 
And If i install AMBER 9, are there still 2 bugfix.all files that will have to apply?
 
I am using Ubuntu, for install AMBER 9 xorg-dev package also need??
 
I download l_fcompxe_ia32_2011.2.137.tgz, and it is the latest version. But after i finished, i type 'which ifort', it did not give any response.
 
 
Thanks



At 2011-02-14 20:41:27£¬"Jason Swails" <jason.swails.gmail.com> wrote:

>2011/2/14 gromacs <ptf1242.163.com>
>
>> Hi,
>>
>> WcActCB.c:1450: error: expected declaration specifiers before ¡®Widget¡¯
>> WcActCB.c:1450: error: expected declaration specifiers before ¡®XEvent¡¯
>> WcActCB.c:1450: error: expected declaration specifiers before ¡®Cardinal¡¯
>> WcActCB.c: In function ¡®WcDynamicCallbackACT¡¯:
>> WcActCB.c:1452: error: expected declaration specifiers before ¡®Widget¡¯
>> WcActCB.c:1452: error: expected declaration specifiers before ¡®XEvent¡¯
>> WcActCB.c:1452: error: expected declaration specifiers before ¡®Cardinal¡¯
>> WcActCB.c: In function ¡®WcRegisterWcActions¡¯:
>> WcActCB.c:1461: error: expected declaration specifiers before
>> ¡®XtAppContext¡¯
>> WcActCB.c:1463: error: expected ¡®=¡¯, ¡®,¡¯, ¡®;¡¯, ¡®asm¡¯ or ¡®__attribute__¡¯
>> before ¡®WcActions¡¯
>> WcActCB.c:1463: error: ¡®WcActions¡¯ undeclared (first use in this function)
>> WcActCB.c:1463: error: expected expression before ¡®]¡¯ token
>> WcActCB.c:1536: error: expected ¡®=¡¯, ¡®,¡¯, ¡®;¡¯, ¡®asm¡¯ or ¡®__attribute__¡¯
>> before ¡®already¡¯
>> WcActCB.c:1536: error: ¡®already¡¯ undeclared (first use in this function)
>> make[2]: *** [WcActCB.o] Error 1
>> make[2]: Leaving directory `/home/uqtpeng1/AMBER/amber9/src/leap/src/Wc'
>> make[1]: *** [install] Error 2
>> make[1]: Leaving directory `/home/uqtpeng1/AMBER/amber9/src/leap'
>> make: *** [serial] Error 2
>>
>> I have gfortran and i installed at different desktops. When 'sudo make
>> series', the error will come. WcCreate.h:,
>>
>
>Have you applied all bug fixes to your version of Amber and AmberTools (note
>there will be 2 bugfix.all files that you will have to apply.
>
>
>>
>> How can i solve this problem. I also cannot find a ifort in Inter website.
>> Even if i download the interfortran from that site, it is not easy to
>> install.
>>
>
>Make sure that you have all bug fixes applied and that you have the X
>developer package installed:
>
>On new Fedora OS's install the libXt-devel libXext-devel
>libX11-devel libICE-devel libSM-devel packages.
>On old Fedora OS's install the xorg-x11-devel package.
>On RedHat OS's install the XFree86-devel package.
>On Ubuntu OS's install the xorg-dev package.
>For the moment Amber will be configured not to build XLEaP.
>
>As far as installing the intel compiler suite; if you have obtained a
>license for it (academic or commercial or whatever), you get an installer
>package that you just have to launch and follow the on-screen prompts (at
>least for versions as recent as 11.1.069).
>
>Good luck!
>Jason
>
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
>
>--
>Jason M. Swails
>Quantum Theory Project,
>University of Florida
>Ph.D. Candidate
>352-392-4032
>_______________________________________________
>AMBER mailing list
>AMBER.ambermd.org
>http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Feb 14 2011 - 16:30:04 PST
Custom Search