Re: [AMBER] sander on amber12

From: setyanto md <stwahyudi.md.gmail.com>
Date: Mon, 31 Jan 2011 12:09:59 +0700

Dear Ross and Jason

Thank you for your respond.

Anyway I still pray and hope that sander can run on GPU. But I realized that
pray only is not enough.
I wish you all the best.

May we get little information about when the AMBER 12 will be release? Cause
my supervisor right now is considering to buy AMBER11 or wait for AMBER12.

Thank you very much

best regards

setyanto

On Fri, Jan 28, 2011 at 10:30 PM, Ross Walker <ross.rosswalker.co.uk> wrote:

> Hi Setyanto,
>
> > Right now only PMEMD that support for GPU. When Sander can run on GPU?
> > Is it right that Sander in AMBER 12 can run in GPU?
>
> This was one of the original goals of the NSF SSI-SSE proposal myself and
> Adrian Roitberg submitted. However, NSF did not give us sufficient funding
> or duration to do this part of the project so it had to be cut from the
> goals. I hope you appreciate such funding issues are a sad fact of life in
> science these days. Should we be successful in obtaining sufficient
> additional funding for the GPU work then adding support for sander is on my
> list of objectives.
>
> All the best
> Ross
>
>
> /\
> \/
> |\oss Walker
>
> ---------------------------------------------------------
> | Assistant Research Professor |
> | San Diego Supercomputer Center |
> | Adjunct Assistant Professor |
> | Dept. of Chemistry and Biochemistry |
> | University of California San Diego |
> | NVIDIA Fellow |
> | http://www.rosswalker.co.uk | http://www.wmd-lab.org/ |
> | Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
> ---------------------------------------------------------
>
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Received on Sun Jan 30 2011 - 21:30:02 PST
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