Hi,
I want to dock a complex of proteins (as a ligand) to another protein
(receptor). The tutorial using AMBER score in DOCK 6 (
http://dock.compbio.ucsf.edu/DOCK_6/tutorials/amber_score/amber_score.htm)
just applies for small molecule as ligands (i.e drug) because it uses
Antechamber to generate the input file.
The Antechamber seems not to work for protein, I think, because it gave me
errors.
Could anyone please give me some idea or links so I can figure it out?
Thank you.
Chinsu
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Received on Tue Jan 18 2011 - 19:30:02 PST
