This is fine. The error is just trying to change a comment in the code, and
should not affect installation. You should be able to proceed with the rest
of the MMPBSA.py installation process.
Good luck!
-Bill
On Fri, Dec 17, 2010 at 12:58 PM, George Tzotzos <gtzotzos.me.com> wrote:
> I downloaded today the MMPBSA.py bug fixes from
> http://ambermd.org/tutorials/advanced/tutorial3/py_script/mmpbsa_patches.html
>
> Applied them on the new MMPBSA.py tarball downloaded from
> http://ambermd.org/tutorials/advanced/tutorial3/py_script/compile.htm
>
> patch -p0 -N < mmpbsa.patch.all
>
> produced the output below.
>
> My question is whether this is something to worry about or should one
> proceed with the installation of MMPBSA.py.MPI
>
> Thanks in advance and regards
>
> George
>
>
> patching file src/mmpbsa_py/MMPBSA.py
> patching file src/mmpbsa_py/MMPBSA.py.MPI
> patching file src/mmpbsa_py/mmpbsa_entropy.nab
> patching file src/mmpbsa_py/Makefile
> Reversed (or previously applied) patch detected! Skipping patch.
> 1 out of 1 hunk ignored -- saving rejects to file
> src/mmpbsa_py/Makefile.rej
> patching file src/mmpbsa_py/utils.py
> patching file src/mmpbsa_py/MMPBSA.py.MPI
> Hunk #1 succeeded at 1020 (offset -3 lines).
> patching file src/mmpbsa_py/utils.py
> Hunk #1 FAILED at 4.
> 1 out of 4 hunks FAILED -- saving rejects to file
> src/mmpbsa_py/utils.py.rej
>
> _______________________________________________
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Bill Miller III
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-6715
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Received on Fri Dec 17 2010 - 10:30:02 PST
