On Fri, Dec 10, 2010, lnedialkova.gmail.com wrote:
>
> I wanted to use ambpdb to convert a mdcrd file to pdb format. I use the
> following syntax:
>
> ambpdb -p prmtop < mdcrd > md.pdb
This won't work, as you found out. Use ptraj to convert a whole trajectory
to pdb files: trajin is your trajectory, add the "pdb" keyword to the trajout
variable.
....dac
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Received on Fri Dec 10 2010 - 11:30:11 PST
