in leap use this command:
solvatebox <nameofyourstructure> TIP3PBOX 8.0
Oliver
On 7 December 2010 12:00, leila karami <karami.leila1.gmail.com> wrote:
> Dear amber users
>
> I'm beginner in amber.
>
> I want to have a water box with following conditions:
>
> water model = TIP3P
> distance between the solute and wall of the box = 8 angstroms
> number of water molecules = 7400
> box type = cubic
> box length = 62 angstroms
>
> How I should use solvatebox for obtaining them?
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Dec 07 2010 - 07:30:03 PST
