[AMBER] hydrogen bond analysis of gromacs simulation by amber (direct and water mediated HB)

From: leila karami <karami.leila1.gmail.com>
Date: Tue, 7 Dec 2010 09:56:01 +0330

Dear Jason Swails

very very thanks for your help

ok. I should use more tutorials to learn about amber. I searched about
conversion gromacs topology (*.top) to amber
topology (*.prmtop), but I didn't find good answer. please guide me about
this. because in using of ptraj *.prmtop file is

Leila Karami
Ph.D. student of Physical Chemistry
K.N. Toosi University of Technology
Theoretical Physical Chemistry Group
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Received on Mon Dec 06 2010 - 22:30:02 PST
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