[AMBER] hydrogen bond analysis of gromacs simulation by amber (direct and water mediated HB)

From: leila karami <karami.leila1.gmail.com>
Date: Mon, 6 Dec 2010 11:43:35 +0330

Dear Jason Swails

thanks for your attention.

I'm beginner in using amber. please answer to my question thorough and

what input files are necessary for hydrogen bond analysis by amber? How to
convert gromacs file to amber files?

any help will highly appreciated.

Leila Karami
Ph.D. student of Physical Chemistry
K.N. Toosi University of Technology
Theoretical Physical Chemistry Group
AMBER mailing list
Received on Mon Dec 06 2010 - 00:30:04 PST
Custom Search