Re: [AMBER] Truncated Octahedron Box in Amber9

From: Alexander Metz <>
Date: Thu, 18 Nov 2010 08:53:50 +0000 (GMT)

Hi Russel,

just use the "solvateOct" command instead of the "solvateBox" command. It is
described in the AmbterTools manual. Most (all?) tutorials from the AMBER
homepage seem to use boxes ... but a truncated octahedron works equally.


Von: Bertrand Russell <>
Gesendet: Donnerstag, den 18. November 2010, 8:44:07 Uhr
Betreff: [AMBER] Truncated Octahedron Box in Amber9

Dear Amber Users,

                         I am a novice in Amber and Molecular Dynamics
Simulations. I wonder is it possible to setup a truncated octahedron box
using tleap? If so could someone shed some light on how or point out some

I would be very kind to you.

With Kind regards,
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Received on Thu Nov 18 2010 - 01:00:04 PST
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