Re: [AMBER] protonate a non standard residu

From: Philippe Pinard <>
Date: Fri, 12 Nov 2010 08:41:46 -0800 (PST)

From: Philippe Pinard <>
Sent: Fri, November 12, 2010 4:19:22 PM
Subject: protonate a non standard residu

Dear Amber users

I have a molecule which contains many non standard residus I created. I want to
protonate these residus at specific N positions, is thee a straightforward way
to do it with leap, without having to protonate by hand all the pdb file?
Thanks very much in advance for any help

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Received on Fri Nov 12 2010 - 09:00:04 PST
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