I just set the AMBERHOME to amber11 and retry, but the error is the same.
2010/11/5 Alice Wang <compu.chem.w.gmail.com>
> Linux W1310a 2.6.9-42.ELsmp #1 SMP Wed Jul 12 23:32:02 EDT 2006 x86_64
> x86_64 x86_64 GNU/Linux
>
> GNU Fortran 95 (GCC) 4.1.0 20060515 (Red Hat 4.1.0-18)
> Copyright (C) 2006 Free Software Foundation, Inc.
>
> GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> You may redistribute copies of GNU Fortran
> under the terms of the GNU General Public License.
> For more information about these matters, see the file named COPYING
>
> echo $AMBERHOME
> /home/program/amber10
>
> echo $MPI_HOME
> /home/program/mpich_1.2.7
>
> For I just want instal amber tools, so I haven't change the $AMBERHOME to
> amber11.
>
> thank you very much!
>
> 2010/11/5 David Watson <dewatson.olemiss.edu>
>
> Alice,
>>
>> It would be very helpful if you would copy and paste the output of the
>> following:
>> uname -a
>> gfortran --version
>> echo $AMBERHOME
>> echo $MPI_HOME
>>
>> On Nov 4, 2010, at 10:58 PM, Alice Wang wrote:
>>
>> > Dear,
>> >
>> > ./configure gnu
>> > ...ok
>> >
>> > ./make
>> > ....
>> > (cd chamber && make install )
>> > make[1]: Entering directory
>> `/home/program/amber11/AmberTools/src/chamber'
>> > make chamber
>> > make[2]: Entering directory
>> `/home/program/amber11/AmberTools/src/chamber'
>> > cpp -traditional -P -DBINTRAJ psfprm.f > _psfprm.f
>> > gfortran -c -O3 -ffree-form -o psfprm.o _psfprm.f
>> > _psfprm.f: In function ?.et_bonded_params?.
>> > _psfprm.f:658: internal compiler error: Segmentation fault
>> > Please submit a full bug report,
>> > with preprocessed source if appropriate.
>> > See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
>> > make[2]: *** [psfprm.o] Error 1
>> > make[2]: Leaving directory
>> `/home/program/amber11/AmberTools/src/chamber'
>> > make[1]: *** [install] Error 2
>> > make[1]: Leaving directory
>> `/home/program/amber11/AmberTools/src/chamber'
>> > make: *** [serial] Error 2
>> >
>> > what's wrong?
>> >
>> > thanks all
>> >
>> > Alice Wang
>> > _______________________________________________
>> > AMBER mailing list
>> > AMBER.ambermd.org
>> > http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Nov 04 2010 - 21:30:03 PDT
