I suppose, first of all you should load DHU unit into tleap:
tleap -s -f leaprc.ff99SB
> loadamberparams DHU.frcmod
> loadamberprep DHU.prepin
> check DHU
On Tue, Oct 26, 2010 at 4:11 PM, Indrajit Deb <biky2004indra.gmail.com> wrote:
> Dear all,
> I want to prepare modified nucleosides like dihydrouridine, pseudouridine
> etc. I am using the John Santa Lucia modified nucleoside database where the
> .frcmod and .prepin are given for nucleoside monophospahte. I have attached
> it.
> Please anyone help me.
>
> Sincerely
>
> Indrajit
>
>
>
> ---------------------------------------------------------------------
> Indrajit Deb
> Kolkata. India.
> Ph. +919239202278
>
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>
>
--
Dmitry Nilov,
Lomonosov Moscow State University
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Received on Tue Oct 26 2010 - 06:00:06 PDT
