Re: [AMBER] can't save the PDB file to produce topology and coordinates file

From: Bill Ross <ross.cgl.ucsf.EDU>
Date: Sun, 26 Sep 2010 14:39:02 -0700

> I met a strange problem. I use Modeller to produce a target
> protein structure. When I load it in Amber using loadpdb command and
> try to save it for furthure use, error message appears, first telling
> me that there are duplicating atoms,

One thing about leap is that it expects unique atom names in each
residue, so if Modeller creates duplicate names, that would explain
your symptom.

Bill

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Received on Sun Sep 26 2010 - 15:00:03 PDT
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