Re: [AMBER] Problems with Amber 8 PMEMD

From: case <case.biomaps.rutgers.edu>
Date: Tue, 21 Sep 2010 07:23:18 -0400

On Tue, Sep 21, 2010, Su Qiu wrote:
>
> We are faced with a problem while running PMEMD of Amber8 on our parelled
> machine.
> The error reads:
> error while loading shared libraries: libimf.so: cannot open shared object
> file: No such file or directory
> When we tried locate libimf.so, it appeared to be in the lib directory
> (/opt/intel/fce/9.0/lib/libimf.so) where the intel compiler (Intel Fortran
> 90) was installed.

You have to include /opt/intel/fce/9.0/lib in your LD_LIBRARY_PATH
environment variable.

> We also tried source /opt/intel/fce/9.0/bin/ifortvars.sh, but the same error
> appeared.

This script *should* have updated LD_LIBRARY_PATH, but check it to make sure.
I don't have ifort version 9 around anymore to test.

....dac


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Received on Tue Sep 21 2010 - 04:30:08 PDT
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