Re: [AMBER] MM_PBSA fillratio error/ compiling mm_pbsa.pl

From: Bill Miller III <brmilleriii.gmail.com>
Date: Tue, 21 Sep 2010 06:53:56 -0400

You should be able to

cd $AMBERHOME/src/mm_pbsa
make clean
make install

That should do it.

Good luck!

-Bill

On Tue, Sep 21, 2010 at 6:07 AM, Oliver Grant <olivercgrant.gmail.com>wrote:

> Hi there,
>
> I have a fillratio error when running mm_pbsa.pl in Amber 10. It has come
> up
> on the mailing list a few times.
>
> I've followed the instructions in the threads and changed
> mm_pbsa_createinput.pm to contain a line fillratio = 4
>
> Now I have to recomplie the perl script but I'm not sure how to do this.
> I've checked the ambertools manual and threads but can't find instructions.
>
> Would someone be able to help me out?
>
> Thanks in advance for your help,
>
> Oliver
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>



-- 
Bill Miller III
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-6715
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Received on Tue Sep 21 2010 - 04:00:04 PDT
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