I don't have any of these. I am trying to compile on teragrid and don't have
permissions to add those libraries there (if that's the solution). Is there
any other way out?
On Sat, Sep 18, 2010 at 9:05 PM, Jason Swails <jason.swails.gmail.com>wrote:
> Hello,
>
> On Sat, Sep 18, 2010 at 10:00 PM, Anuradha Mittal <
> anuradha.mittal.gmail.com
> > wrote:
>
> > Hi,
> >
> > I am trying to install Amber11 in parallel using intel processor.
> >
> > I am getting the following error:
> > ld: cannot find -lrdmacm
> > make[2]: *** [pmemd.MPI] Error 1
> > make[2]: Leaving directory `/u/ac/amitta2/amber11/src/pmemd/src'
> > make[1]: *** [parallel] Error 2
> > make[1]: Leaving directory `/u/ac/amitta2/amber11/src/pmemd'
> > make: *** [parallel] Error 2
> >
> > which mpif90
> > /usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/bin/mpif90
> >
> > which mpirun
> > /usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/bin/mpirun
> >
> > mpif90 -show
> > ifort -L/usr/local/ofed-1.2.5.5/lib64
> > -I/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/include
> > -I/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/include
> > -L/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/lib -lmpichf90 -Wl,-rpath
> > -Wl,/usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/lib -lmpichf90 -lmpich
> > -lpthread -lrdmacm -libverbs -libumad -lrt
> >
>
> Do you see a "librdmacm.so" or "librdmacm.a" in
> usr/local/mvapich2-1.2-intel-ofed-1.2.5.5/lib ? For some reason, your
> install is having a hard time finding one of these files.
>
>
> >
> > Any help will be much appreciated.
> >
> > Thanks
> > Anu
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Sep 18 2010 - 19:30:06 PDT
