Re: [AMBER] amber7 vs xleap on 64bit machine

From: Rossella Noschese <noschese.rossella.gmail.com>
Date: Wed, 8 Sep 2010 15:06:00 +0200

thanks for your help,
this is what i did:
My echo $AMBERHOME is : /usr/local/bin/amber7
so I copied amber11 directory in /amber7
then I typed
set path = ( $path $AMBERHOME/exe )
set path = ( $path $AMBERHOME/amber11/bin )
but il still doesn't work.... What's wrong with that?


2010/9/8, Jason Swails <jason.swails.gmail.com>:
>
> Hello,
>
> Leap has undergone many fixes since 64-bit computing has become
> commonplace. You should download the new AmberTools 1.4 from
> ambermd.organd compile it. All you have to do is build AmberTools 1.4
> in its own
> directory (it automatically unpacks into amber11), and set that directory
> to
> AMBERHOME. Then, just make sure that both amber7/exe and amber11/bin are
> in
> your PATH and you can use both sets of executables.
>
> Good luck!
> Jason
>
>
> On Wed, Sep 8, 2010 at 5:48 AM, Rossella Noschese <
> noschese.rossella.gmail.com> wrote:
>
> > Hi,
> >
> > I have some problems with running xleap graphical window. We have Amber7
> on
> > a 64 bit machine (Fedora core). When I try to type the "edit" command to
> > start the Unit Editor (both with pdb file loaded and with new object) it
> > shows this error message :
> > "segmentation falut (core dumped)"
> >
> > and the Universe Editor crashes.
> > I read I should try downloadin AmberTool from the amber site, but how can
> I
> > connect AmberTool with Amber7?
> > Please help me!!
> > Thanks in advance!!
>
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Wed Sep 08 2010 - 06:30:03 PDT
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