Hi, ganesh
I guess you have to trajout a large mount of pdbs (maybe up to thousand)
and then write a shell script to calculate their volumes by the software
such as SURFNET or VOIDOO.
regards,
Jia
On Mon, Aug 23, 2010 at 11:30 AM, Ganesh Kamath <gkamath9173.gmail.com>wrote:
> Hi All,
>
> Is there a way to calculate the pore volume of a protein. I have a
> trajectory and wish to compute the volume of
> the active site as a function of time.
> Could anyone please suggest a way.
>
> thanks for all the help.
>
> regards,
> ganesh
>
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Received on Mon Aug 23 2010 - 10:30:05 PDT
