Hello!
I get this error while running ./configure gnu.
pu-chunke.ubuntu:~/Downloads/amber11/AmberTools/src$ ./configure gnu
Your AMBERHOME environment variable should be set to
/home/pu-chunke/Downloads/amber11
Obtaining the gnu suite version:
gcc -v
The version is 4.4.3
Testing the gcc compiler:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c
OK
Validating the C++ compiler version:
g++ -v
The version is
[: 1340: -lt: unexpected operator
OK
Testing the gfortran compiler:
gfortran -O0 -o testp testp.f
./configure: 1340: gfortran: not found
./configure: 1340: ./testp: not found
Unable to compile a Fortran program using gfortran -O0
We will be unable to compile sqm
Testing mixed C/Fortran compilation:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -c -o testp.c.o testp.c
gfortran -O0 -c -o testp.f.o testp.f
./configure: 1340: gfortran: not found
gcc -o testp testp.c.o testp.f.o -lgfortran
gcc: testp.f.o: No such file or directory
./configure: 1340: ./testp: not found
WARNING: Unable to compile mixed C/Fortran code.
Testing pointer size:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o test_pointer_size
test_pointer_size.c
Detected 32 bit operating system.
Testing flex:
./configure: 1340: flex: not found
Unable to run flex; this is recommended for NAB
Please check your PATH, or install the program
We will try to solider on with precompiled files
Configuring NetCDF; (may be time-consuming)
Error: NetCDF configure returned 1
NetCDF configure failed! Check the netcdf_config.log file.
Continuing but NetCDF will be skipped.
Configuring fftw-2.1.5; (may be time-consuming)
Error: fftw configure returned 1
fftw configure failed! Check the fftw2_config.log file.
Please can you tell me how should I get rid of this error?
Thank!
Priyanka
--
Priyanka Bhattacharya
PhD candidate
Laboratory of Single-Molecule Biophysics and Polymer Physics
Department of Physics and Astronomy, Clemson University
Lab: Jordan 110
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Received on Mon Aug 16 2010 - 07:30:07 PDT
