Hi,
Use the append flag for the trajout.
Arik
On 8/11/2010 3:30 PM, Philippe Pinard wrote:
> Hi Amber users
>
> I would like to inspect snapsho trajectories at given time when computing the
> radial density distributions with ptraj but my script that I atach to this email
> gives my tons of .pdb files, is there please a smarter way to get just few at
> specific timestep?
> Thanks for your help!
> trajin G4_bond_wat_md1_exp.mdcrd
> trajin G4_bond_wat_md2_exp.mdcrd
> trajin G4_bond_wat_md3_exp.mdcrd
> radial G4_bond_wat_rad_dens_wat_58_121_H19.rdf 0.5 40.0 :WAT.O :58-121.H19
> closest density 0.033456
> trajout traj.pdb 1 pdb
> go
>
>
>
>
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Received on Wed Aug 11 2010 - 16:00:05 PDT
