use imin=5, gbsa=1 or 2, and surften=1. the esurf will be the surface area,
extract it using something like grep/awk.
On Mon, Aug 9, 2010 at 10:58 AM, Beale, John <John.Beale.stlcop.edu> wrote:
>
> I need to determine the solvent accessible surface area of a protein with
> time over the course of a MD trajectory. Does anyone have a method for doing
> this?
>
> John
>
>
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Received on Mon Aug 09 2010 - 08:30:03 PDT
