On Mon, Jul 26, 2010, Xioling Chuang wrote:
>
> As mentioned in AmberTools users' manual, the parameters for ions in
> "ions08.lib" is better than "ions94.lib". Thus, I tried to generate
> topology file of poly(AT) in 1M KCl (as well as 1M NaCl) using
> "ions08.lib" and "frcmod.ionsjc_tip3p" obtained from AmberTools1.3. My
> question is that can I use these topology and coordinate files with
> SANDER in AMBER9?
Yes....dac
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Received on Mon Jul 26 2010 - 05:00:03 PDT
