Re: [AMBER] residues lacking connect

From: case <case.biomaps.rutgers.edu>
Date: Sun, 18 Jul 2010 18:24:28 -0400

On Sat, Jul 17, 2010, Jorgen Simonsen wrote:
>
> I am make parameters for a modified methionine residue - I follow the
> tutorial and use their mem.lib for my protein just to observe if it works.
> For the modified histidine there is no problem but I get the warning/error
> at the end that
>
> Not Marking per-residue atom chain types.
> Marking per-residue atom chain types.
> (Residues lacking connect0/connect1 -
> these don't have chain types marked:
>
> res total affected
> MEM 3

Note that this is an informational message, not an error. I don't see
right now what is triggering it, but you can probably ignore it -- best to
check the bond list, though, just to be sure.

....dac


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Received on Sun Jul 18 2010 - 15:30:03 PDT
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