Jason is right. The Ptraj mask parser does not accept whitespace. In
the first command 'N,' and 'CA' will be interpreted as arguments to
the rms command.
On Thu, Jul 8, 2010 at 7:18 AM, Jason Swails <jason.swails.gmail.com> wrote:
> This seems easy enough to find out. Try each one, and see if you get the
> same result or not. I'm guessing you'll get an error with spaces, since it
> has no reason not to parse .C, N, and CA as different arguments. Maybe
> putting double-quotes around it will help, maybe not. I always use the
> space-less version.
>
> Good luck!
> Jason
>
> On Thu, Jul 8, 2010 at 12:57 AM, Homa Azizian <homa.azizian.anu.edu.au>wrote:
>
>> Hi all,
>> I have a question about rms, is it any difference between these to command:
>> rms first .C, N, CA
>> rms first .C,N,CA
>> is this command space sensitive?
>> Thanks for replying
>> Homa
>>
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>
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
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Received on Thu Jul 08 2010 - 05:00:03 PDT
