[AMBER] how to allign the protein with average pdb

From: REENU KHATTRI <ibi2008024.iiita.ac.in>
Date: Mon, 28 Jun 2010 12:20:46 +0530

hello sir i am calculating rmsd residue wise but result is not good i want
to first align or superimpose the protein with average pdb and use this
trajout file to perresidue wise calculation is any command to align a
protein.
RINU KHATTRI
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Jun 28 2010 - 00:00:05 PDT