Re: [AMBER] dna

From: case <>
Date: Fri, 25 Jun 2010 09:54:08 -0400

On Fri, Jun 25, 2010, wrote:

> actually i also got HO5' only but seeing some tutorial referance i changed to
> H5T.

What happens if you don't make such changes, and continue to use AmberTools

> and did u see that the terminal residues are not correctly bonded.

Can you say exactly what is "not correctly bonded", and why you came to that

> still i am facing same problem of not getting parameters

We need *specific* problem reports: the actual inputs, and exact error
messages. Try to see how what you are doing is different from that shown
in Tutorial B1.


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Received on Fri Jun 25 2010 - 07:00:07 PDT
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