Re: [AMBER] speed of analysis

From: Ross Walker <>
Date: Tue, 22 Jun 2010 22:12:06 -0700

> Is it true that by stripping water only we save the space and only the
> speed of analysis increased?

As opposed to???

Stripping the water makes your trajectory file smaller. This saves disk
space and also makes it much quicker to do analysis line backbone RMSD etc.
It also makes visualization less memory intensive.

All the best

|\oss Walker

| Assistant Research Professor |
| San Diego Supercomputer Center |
| Tel: +1 858 822 0854 | EMail:- |
| | |

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Received on Tue Jun 22 2010 - 22:30:05 PDT
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