Re: [AMBER] remove water from system

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Tue, 20 Apr 2010 06:06:21 -0400

Use the ptraj strip command. Look in the manual or search inthe web
site.

On Apr 20, 2010, at 4:09 AM, Yunfen Wang <wangfen041237.163.com> wrote:

> Hi all,
> I have done MD simulations of protein in water and got the
> trajectory file . But now , i want to analysis dihedral angel of the
> Pr , how can i get the trajectory file of pr only . Or , it just
> need the final structure of pr to analysis dihedral angel. if this
> is true , how to character the change with time? Any instruction ?
> Thank you !
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Received on Tue Apr 20 2010 - 03:30:02 PDT
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