[AMBER] how do MM_PBSA without water

From: geyan <geyan.big.ac.cn>
Date: Sun, 18 Apr 2010 15:48:06 +0800

Dear Amber users,
     I have got the trajectory of a system of DNA-Protein complex. Because I konw they'are interacting with each other without water in nature,so I didn't add solvent effect.Now the problem is,how I alter the script from the Amber Tutorial of MM_pbsa to extract snapshot and do the accurate PBSA analysis.The standard input of the two scripts is a little too complex for me to change,it has beyond my scope.
     Any help is appreciated


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Received on Sun Apr 18 2010 - 01:00:03 PDT
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