Re: [AMBER] loadmol2 Segmentation fault

From: FyD <fyd.q4md-forcefieldtools.org>
Date: Thu, 15 Apr 2010 19:23:09 +0200

Dear Dr Case,

>> xleap
>> SUS = loadmol2 sustiva.mol2
>> =>
>> [fyd.master0 ~]$ xleap
>> -I: Adding /usr/local/amber10/dat/leap/prep to search path.
>> -I: Adding /usr/local/amber10/dat/leap/lib to search path.
>> -I: Adding /usr/local/amber10/dat/leap/parm to search path.
>> -I: Adding /usr/local/amber10/dat/leap/cmd to search path.
>> /usr/local/amber10/exe/xleap: line 9: 2623 Erreur de segmentation
>> /usr/local/amber10/bin/xaLeap -I/usr/local/amber10/dat/leap/prep
>> -I/usr/local/amber10/dat/leap/lib -I/usr/local/amber10/dat/leap/parm
>> -I/usr/local/amber10/dat/leap/cmd $*
>
> I've lost the thread here a bit, but this sounds(?) like the problem fixed
> with bugfix.10 for AmberTools 1.2. Have you applied that bugfix? If so, and
> it still fails, can you (re-)post the mol2 file you are using?

[fyd.master0 amber10]$ grep "Bugfix" bugfix.all
********>Master Bugfix File - Amber 10 Bug fixes 1 to 8
[...]

You are right 'my' bugfix.all file stops at Bugfix 8...

regards, Francois




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Received on Thu Apr 15 2010 - 10:30:03 PDT
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