Re: [AMBER] loadmol2 Segmentation fault

From: David A. Case <case.biomaps.rutgers.edu>
Date: Thu, 15 Apr 2010 11:02:38 -0400

On Thu, Apr 15, 2010, FyD wrote:
>
> xleap
> SUS = loadmol2 sustiva.mol2
> =>
> [fyd.master0 ~]$ xleap
> -I: Adding /usr/local/amber10/dat/leap/prep to search path.
> -I: Adding /usr/local/amber10/dat/leap/lib to search path.
> -I: Adding /usr/local/amber10/dat/leap/parm to search path.
> -I: Adding /usr/local/amber10/dat/leap/cmd to search path.
> /usr/local/amber10/exe/xleap: line 9: 2623 Erreur de segmentation
> /usr/local/amber10/bin/xaLeap -I/usr/local/amber10/dat/leap/prep
> -I/usr/local/amber10/dat/leap/lib -I/usr/local/amber10/dat/leap/parm
> -I/usr/local/amber10/dat/leap/cmd $*

I've lost the thread here a bit, but this sounds(?) like the problem fixed
with bugfix.10 for AmberTools 1.2. Have you applied that bugfix? If so, and
it still fails, can you (re-)post the mol2 file you are using?

...thanks...dac


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Received on Thu Apr 15 2010 - 08:30:03 PDT
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