Re: [AMBER] regarding parameter file creation of dna-lig complex

From: Asfa Ali <>
Date: Wed, 14 Apr 2010 10:10:45 +0530


I had given the following command which are in accordance with the tutorial.
Please tell me where am I wrong.

$antechamber -i prp3_RESP.log -fi gout -o prp3.mol2 -fo mol2 -c resp
  - no error

$ parmchk -i prp3.mol2 -f mol2 -o prp3.frcmod
   -no error

$ tleap -f ( attached)
   -no error

$ tleap -f ( attached)
  -gives error (just see the previous mail)

I don't understand wher am I getting wrong? Please suggest me how to solve
this problem.


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Received on Tue Apr 13 2010 - 22:00:03 PDT
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