Thanks, Jason.
Thanks for suggestion. I have installed successfully.
I installed the flex
Also change some environment values, i forgot to add $AMBERHOME/exe to my PATH environment variable.
and in case of authority problem, i changed the another location to install.
Anyway, I successed. and thanks again.
> Date: Fri, 9 Apr 2010 19:38:54 -0400
> Subject: Re: [AMBER] Install AMBER problem.
> From: jason.swails.gmail.com
> To: amber.ambermd.org
>
> 2010/4/9 Trojan 007 <trojan.007.hotmail.com>:
> >
> > I install AMBER11 in Ubuntu.
> >
> > Following the install insturction. in the 4th step
> > make -f Makefile_at
> > The mak failed, shown as followed:
> >
> > .......
> > .......
> > cp nabcode.h /usr/local/amber11/include
> > cp nabtypes.h /usr/local/amber11/include
> > cp defreal.h /usr/local/amber11/include
> > cp nab.h /usr/local/amber11/include
> > cp xmin_opt.h lmod_opt.h /usr/local/amber11/include
> > cp lmodprmtop /usr/local/amber11/bin
> > make[1]: Leaving directory `/usr/local/amber11/src/nab'
> > (cd nss && make install )
> > make[1]: Entering directory `/usr/local/amber11/src/nss'
> > ar rv /usr/local/amber11/lib/libnab.a symop.o matop.o tss.o
> > a - symop.o
> > r - matop.o
> > a - tss.o
> > ranlib /usr/local/amber11/lib/libnab.a
> > /usr/local/amber11/bin/nab -o matgen matgen.o
> > /usr/local/amber11/lib/libnab.a(sff.o): In function `mm_options':
> > sff.c:(.text+0x296e): undefined reference to `mmolex'
> > collect2: ld returned 1 exit status
> > cc failed!
> > make[1]: *** [matgen] Error 1
> > make[1]: Leaving directory `/usr/local/amber11/src/nss'
> > make: *** [serial] Error 2
> >
> >
> > Anybody can give me a help, and tell what's the problem?
> > Thanks
>
> Install flex from aptitude.
>
> sudo apt-get install flex
>
> then re-try installation.
>
> Good luck!
> Jason
>
> >
> >
> >
> >
> >
> > _________________________________________________________________
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> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> ---------------------------------------
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
>
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Received on Sat Apr 10 2010 - 18:00:02 PDT
