On Wed, Mar 03, 2010, Anna Dejardin wrote:
>
> I tried replacing cp -p with mv in the Makefile. But now when I run
> tests it seems to stop short and the final message it prints is this error:
>
> cd antechamber/top2mol2 && ./Run.top2mol2
>
> Cannot open atom type corresponding file
> /homes/acd/amber11:/dat/antechamber/ATOMTYPE_CHECK.TAB, exit
^^^^^^^^^
The error message is pretty clear (by Amber standards!). It can't find
the file in question, which is not surprising, since it has a ":" in its
name. My best guess is that your AMBERHOME variable is incorrect, probably
set to "/homes/acd/amber11:" rather than "/homes/acd/amber11".
See if that helps....dac
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Received on Wed Mar 03 2010 - 05:30:02 PST
