[AMBER] PBC interactions

From: Ganesh Krishnan <hereisganesh.yahoo.com>
Date: Mon, 1 Mar 2010 13:51:14 -0800 (PST)

I am trying to simulate an "infinite polymer" system using AMBER. While I understand that bonds cannot go through the periodic boundary, can one end of a molecule interact (non-bonded) with the other end through the periodic boundary? Is there any problem with such an approach?

Ganesh Krishnan
NC State Univ

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Received on Mon Mar 01 2010 - 14:00:03 PST
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