Hi,
You'd better ask this kind of questions at VMD site, but did you try
'crdbox' instead of 'crd'?? Doesn't your trajectory have box information?
mol addfile trajectory.crd type crdbox
2010/2/16 Rebeca García Fandiño <regafan.hotmail.com>
>
> Hi,
> I have a NAMD/Charmm trajectory processed with ptraj.
>
> To open it with VMD I have to load manually the psf and the trajectory
> selecting Amber coordinates, and there is no problem.
>
> However, when I want to load the trajectory using the text mode, I write:
>
> mol load psf psf_file.psf
> mol load crd trajectory.crd
>
> And it does not work. I have tried to delete the first line of the file
> "trajectory.crd" that is "trajectory generated by ptraj", but it does not
> work either.
>
> Could you please tell me how could I load this trajectory using the text
> mode of vmd?
>
> Thank you very much,
>
> Rebeca Garcia Fandino
>
>
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--
Best,
InSuk Joung
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Received on Tue Feb 16 2010 - 11:00:02 PST
