Sir,
I have tried minimising(Minimisation Stage 1) the DNA (1kf1) by restraining
the DNA and the potassium ions where I want to apply force constants of 500
kcal/mol to DNA( residues 0 to 21) and 50 kcal/mol to the two K+ ions
(residues 22& 23) simultaneously. However The output file shows that the
reastraint is being applied on the residues 22 & 23 only.
I am attaching the input file for the minimisation.
Please help me to solve the problem.
Thanking you,
Yours sincerely,
Asfa Ali.
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Received on Sun Feb 07 2010 - 21:30:02 PST
