Thanks Dr. Case -- your helpful reply and your response time were really
speedy compared to my "Read e-mails" time!
Bob Hopkins
-----Original Message-----
From: amber-bounces.ambermd.org [mailto:amber-bounces.ambermd.org] On
Behalf Of case
Sent: Friday, February 05, 2010 12:45 PM
To: AMBER Mailing List
Subject: [Possible Spam: 10%] Re: [AMBER] FW: Problem reading PDB
residues in AmberTools-1.3
On Fri, Feb 05, 2010, Hopkins, Robert wrote:
>
> I just realized I should have also sent the PDB file with the e-mail
below.
But the original post has already been replied to:
http://archive.ambermd.org/201002/0080.html
Did that not help?....dac
> I'm using AmberTools-1.3 in a Cygwin environment. After I created
> several PDB files in ptraj, I then loaded each of them into xleap for
> further processing. The leap.log in each case indicates that *none*
of
> the residues (e.g., DC5, DG, Na+, WAT, etc.) was recognized by xleap
(or
> by tleap when I tried that), yet the functioning of either leap
program
> appeared to be fine otherwise. An example leap.log file is attached.
> Any suggestions would be greatly appreciated!
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Received on Fri Feb 05 2010 - 11:00:03 PST
