Dear Amber community:
I wish to perform MD simulations on a triple molecular system using Amber
version 10:
Protein-double stranded DNA-a deoxynucleotide triphosphate.
Double stranded DNA contains lesions.
I would greatly appreciate if:
- you could share the force fields parameters files for:
1. Deoxynucleotide triphosphate, preferable, dATP
2. cyclobutane thymine dimer
3. N2-furfuryl-dGTP
OR
- you could provide advice where I can obtain the files in such suitable
format which would allow me to load these files directly in tleap.
Thank you very much for your help in advance,
Jana.
********************************************
* Ph.D. Graduate *
* Chemistry Department *
* University of Michigan *
* *
*
http://www.umich.edu/~rnapeopl/ *
********************************************
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Received on Fri Jan 29 2010 - 10:00:03 PST
