Dear Anselm and Soumya,
Thanks for your help.
With Regards
Imtiaz
2010/1/27 Anselm Horn <Anselm.Horn.biochem.uni-erlangen.de>:
> Hi,
>
> the T1P atom names in your pdb file must match the atom names in the
> parameter file.
>
> When you load your pdb file containing T1P, leap complains that one atom
> name is unknown (cf section 4, in your e-mail):
>> The file contained 1 atoms not in residue templates
>
> A comparison between the atom names in the Y1P parameter file and your
> pdb file reveals that "OG1" in your file must be renamed to "OG".
> Then it should work.
>
> All the best,
>
> Anselm
>
> Bioinformatik
> Institut für Biochemie
> Friedrich-Alexander-Universität Erlangen-Nürnberg
> Germany
>
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Received on Wed Jan 27 2010 - 05:30:03 PST
