[AMBER] Amber10 Installation

From: sikander azam <syedazam2008.gmail.com>
Date: Fri, 22 Jan 2010 06:51:46 -0500

Hi!

While installing amber10 on SuSe 11.0 OS, when I am configuring Ambertools
i.e.

./configure gnu

it gives the following

Obtaining the gnu suite version:
      gcc -v
The version is 4.3.1

Testing the gcc compiler:
     gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c
OK

Validating the C++ compiler version:
     g++ -v
The version is 4.3.1
OK

Testing the gfortran compiler:
     gfortran -O0 -o testp testp.f
./configure: line 753: gfortran: command not found
./configure: line 754: ./testp: No such file or directory
Unable to compile a Fortran program using gfortran -O0
We will be unable to compile sqm

Testing flex:
OK

Configuring NetCDF; (may be time-consuming)

   * Error: NetCDF configure returned 1
    NetCDF configure failed! Check the netcdf_config.log file.
    Continuing but NetCDF will be skipped.*

The configuration file, config.h, was successfully created.


The next step is to type 'make -f Makefile_at'

*The result of my uname -a is
*
*Linux linux-fmdn 2.6.25.5-1.1-default #1 SMP 2008-06-07 01:55:22 +0200
x86_64 x86_64 x86_64 GNU/Linux*

*
While thenetcdf_config.log file is*

configure: netCDF 3.6.2
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
configure: checking user options
checking whether CXX is set to ''... no
checking whether FC is set to ''... no
checking whether F90 is set to ''... no
checking whether documentation is to be installed... no
checking whether Fortran compiler(s) should be tested during configure...
yes
checking whether configure should try to set compiler flags... yes
checking whether FFIO will be used... no
checking whether to skip C++, F77, or F90 APIs if compiler is broken... yes
checking whether only the C library is desired... no
checking whether examples should be built... yes
checking whether F77 API is desired... yes
checking whether F90 API is desired... yes
checking whether fortran type sizes should be checked... yes
checking whether C API is desired... yes
checking where to get netCDF C-only library for separate fortran
libraries...
checking whether CXX API is desired... no
checking whether v2 netCDF API should be built... yes
checking whether the ncgen/ncdump should be built... yes
checking whether large file (> 2GB) tests should be run... no
checking whether extreme numbers should be used in tests... yes
checking where to put large temp files if large file tests are run... .
checking whether a win32 DLL is desired... no
checking whether separate fortran libs are desired... no
configure: finding C compiler
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking whether gcc and cc understand -c and -o together... yes
checking for an ANSI C-conforming const... yes
configure: finding Fortran compiler (will not be used if Fortran API is not
desired)
checking whether we are using the GNU Fortran compiler... no
checking whether gfortran accepts -g... no
checking whether we are using the GNU Fortran 77 compiler... no
checking whether gfortran accepts -g... no
configure: setting up Fortran 90
checking for Fortran flag to compile .f90 files... unknown
configure: error: Fortran could not compile .f90 files

*
Kindly help to resolve this*
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Received on Fri Jan 22 2010 - 04:00:02 PST
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