[AMBER] Energy function NAB

From: chaitanya koppisetty <ashok.chalmers.se>
Date: Mon, 18 Jan 2010 11:19:01 +0100 (CET)

Hello Everyone,

I am wondering about the energy function in xmin/mme/md functions in NAB.
On printing the details I could not see the terms like Ebond, Edihedral
and Eangles/torsions. Here is the breakdown of the individual terms by
using e_debug = 1.
               eff.c(2491) enb14 --> 163.349
               eff.c(2492) eel14 --> -2297.386
               eff.c(2525) enb --> -356.142
               eff.c(2526) eel --> 2159.422
               eff.c(2527) e_gb --> -4682.965
               eff.c(2528) esurf --> 0.000
               eff.c(2529) evdwnp --> 0.000


Are these (Ebond, Edihedral and Eangles/torsions) evaluated in some other
term (?) or not calculated at all ?


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Jan 18 2010 - 02:30:02 PST
Custom Search