Re: Re: [AMBER] rms fit to a incomplete file

From: qiaoyan <qiaoyan.dicp.ac.cn>
Date: Thu, 14 Jan 2010 20:57:44 +0800

Dear professor:
    I want to use the crystall structure as reference, but the structure is not complete, it has a loop lost corresponding to resi 15-42, so its structure is from 1-14 and 43-104, when I fit to resi 1-14, it seems normal, but when I fit to resi 43-86, the rmsd is very high, I have adjusted the residue number. what is the problem?
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Received on Thu Jan 14 2010 - 05:00:02 PST
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