[AMBER] software to hydrate protein pockets

From: Vlad Cojocaru <Vlad.Cojocaru.eml-r.villa-bosch.de>
Date: Fri, 23 Oct 2009 14:23:54 +0200

Dear Amber users,

Does anyone know a software (free for academics) to hydrate protein
pockets ? To be more precise, I am interested in a program that can use
the force field parameters (amber or other) and calculate favorable
positions of waters inside close pockets in proteins or other types of
molecules ...

Thanks for any suggestions
Best wishes
Vlad

-- 
----------------------------------------------------------------------------
Dr. Vlad Cojocaru
EML Research gGmbH
Schloss-Wolfsbrunnenweg 33
69118 Heidelberg
Tel: ++49-6221-533202
Fax: ++49-6221-533298
e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de
http://projects.villa-bosch.de/mcm/people/cojocaru/
----------------------------------------------------------------------------
EML Research gGmbH
Amtgericht Mannheim / HRB 337446
Managing Partner: Dr. h.c. Klaus Tschira
Scientific and Managing Director: Prof. Dr.-Ing. Andreas Reuter
http://www.eml-r.org
----------------------------------------------------------------------------
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Oct 23 2009 - 05:30:02 PDT
Custom Search