Dear Amber Users,
When i tried to use antechamber, I found the errors as following:
rileiyu.imb09-02795:~/model/a9-a10-min/single$ $AMBERHOME/exe/antechamber -i sustiva.pdb -fi pdb -o sustiva.mol2 -fo mol2 -c bcc -s 2
Running: /home/rileiyu/amber10/bin/bondtype -j full -i ANTECHAMBER_BOND_TYPE.AC0 -o ANTECHAMBER_BOND_TYPE.AC -f ac
Running: /home/rileiyu/amber10/bin/atomtype -i ANTECHAMBER_AC.AC0 -o ANTECHAMBER_AC.AC -p gaff
Total number of electrons: 160; net charge: 0
Running: /home/rileiyu/amber10/bin/mopac.sh
ln: creating hard link `FOR005': File exists
Error: unable to find mopac charges in mopac.out
Before I used AMBER9, there was no such errors. I even searched the mail-list, but my problem has been solved still. My machine is LINUX, Ubuntu.
Thanks for your help!
Rilei Yu
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Received on Mon Oct 19 2009 - 23:00:03 PDT
