Bala,
> Is there any way to make xleap recognize the 5' phosphate and create the
> topology.
I am note sure I understand your question. If you want a ff library
for the 5' phosphate you could use the dimethylphosphate molecule +
constraints during the fit to generate the corresponding molecular
fragment.
regards, Francois
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Received on Mon Jul 06 2009 - 11:00:02 PDT
