[AMBER] AMBER question: bad atom type: MN

From: Edward M <pckboy.gmail.com>
Date: Tue, 23 Jun 2009 04:05:51 +0100

Greetings

I am trying to do a free energy decomposition analysis
and I encountered a problem with the parameters for Manganese
absent in the file mdread.f

I am using amber9 and I was wondering if anybody can point me to the values
of those parameters, maybe you have them on amber10?.

Thanks in advance

Eduardo Mendez
=>> Calculating energy / entropy contributions
    Calc contrib for ../SNAPSHOTSforATP/doingATP_com.crd.1
        Calc MM/GB/SAS
 bad atom type: MN
        /home/mendez/AMBER9/amber9-ifort/exe/sander -O -i sander_com.in -o
sander_com.1.out -c ../SNAPSHOTSforATP/doingATP_c
om.crd.1 -p ../ProPCK.ATP.Mg.Mn.OAA.prmtop not successful
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Jul 06 2009 - 10:59:01 PDT
Custom Search