Re: [AMBER] 2 restraints with different force constants

From: David A. Case <case.biomaps.rutgers.edu>
Date: Fri, 19 Jun 2009 12:41:01 +0100

On Fri, Jun 19, 2009, Aust, Susanne wrote:
>
> How I can combine these restraints with different force constants (active
> site = frozen (restrainted_wt=50) and rest of protein restrained_wt=10)?

I think if you use the group input (not the "mask" parameters, and
restraint_wt), you can just set different weights for different groups.
Run an experiment to see what happens.

Note that there will probably be a negligible difference between a restraint
weight of 50 and one of 10 -- both are quite strong and will essentially not
allow more than minimal movement.

...dac


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Received on Mon Jul 06 2009 - 10:07:19 PDT
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