Dear AMBER User's
I am a new student using AMBER. In my PDB file, I have two Chains (A and B), chain A has 51 missing residues and chain B has 35 residue missing. Is it normal? should they be identical?
In this case, it will be better for me to pick up chain B, isn't it?
Should I build this missing residues in Xleap before running my jobs? becuase I found that Xleap doesn't add the missing residues like does with missing atoms.
Last point, I found SO4 group in my PDB, not in the active site, should I delete it like extra water?
Thanks in advance
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Received on Mon Jul 06 2009 - 09:05:29 PDT
