Hi There,
I checked the mailing list and so I got "make serial" to work.
I did:
cd $AMBERHOME/..
tar xvfj Amber10.tar.bz2
cd $AMBERHOME
wget -c
http://ambermd.org/bugfixes/10.0/bugfix.all
mv -f bugfix.all bugfixAmber.all
patch -p0 -N < bugfixAmber.all
cd src/
./configure_amber -nosanderidc ifort_macosx
make -j 2 serial
= It's OK = Sander works fine
Now I am trying to find a combination that would allow me to have sander.mpi
('make parallel').
I am using a mac intel (old macbook pro 32 bit only), with Fink (openmpi)
and intel compilers.
Does anyone have a suggestion of how to do this? I have tried:
make clean
./configure_amber -mpi ifort_macosx
make -j 2 parallel
for no avail.
Many thanks in advance.
Alan
--
Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate
Department of Biochemistry, University of Cambridge.
80 Tennis Court Road, Cambridge CB2 1GA, UK.
>>http://www.bio.cam.ac.uk/~awd28<<
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Received on Mon Jul 06 2009 - 08:34:39 PDT
